Welcome to the Crabtree Lab
Home Page and Lab Interest Lab Members and how to contact them.. The things we send out: clones, cell lines, protocols and mice- Articles in the popular press about the Crabtree lab Past Lab Members

Lab Interests: Development of Conditional Alleles
NFAT Signal in Development
Signaling and Chromatin Regulation

A New and General Method of Drug Development: Surface borrowing. An understanding of the mechanism of action of cyclosporin A, FK506 and rapamycin lead us to a new approach to drug development. Many therapeutic targets have been unassailable because they use a large surface area to interact with their targets and bring about a biologic function. Conventional drugs are too small to inhibit these large, somewhat plastic and refined protein interactions. To circumvent this problem we have developed a method in which a small molecule drug candidate borrows the surface area of an endogenous protein to create a composite drug-protein surface that then binds a protein target (see below). Roger Breisiwitz developed this method in the lab by making molecules that fused the FKBP binding entity of FK506 with an SH2-domain binding molecule. This resulted in enhanced affinity providing a proof-of-concept experiment (PNAS 1999). We are working with Tom Wandless's lab in the Chemistry Department to continue development of this class of molecules. Ultimately, we would like to combine this approach with genomic methods for finding protein-protein interactions and chemical diversity approaches for finding small molecule binders to proteins (see SL Schreiber web page) to develop inhibitors to explore biologic processes and develop drugs to now unassailable targets.

 

 Articles about CIDs, Dimerizes and Small Molecule Regulation of Biologic Processes

Spencer et al Science 1993 The frist use of synthetic ligands to control signaling.

Spencer et al PNAS 1995 The first use of synthetic ligands to control non-receptor tyrosine kinases

Holsinger et al PNAS The first use of synthetic ligands to control exchange factors

Clipstone et al J Biol Chem. 1996;269(42):26431-7. The first use of rapamycin as a two-side heterodimerizer.

Ho et al Nature. 1996 Aug 29;382(6594):822-6 The use of CID's to desect mechanisms of transcription

Spencer et al Current Biology 1996 and Belshaw et al Chem Biol 1996 The use of synthetic ligands to control death receptors

Ye X et al Science. 1999 Jan 1;283(5398):88-91 The use of CIDs for regulated gene therapy

Rivera et al. Science 1999 1;283(5398):88-91 The use of CID's to control secretion of therapeutic proteins.

Briesewitz R, Ray GT, Wandless TJ, Crabtree GR. PNAS 96, 1953-1958, March 2, 1999 Affinity modulation of small-molecule ligands by borrowing endogenous protein surfaces

Jon Clardy* PNAS 1999, 96, 1826-1827, Commentary on the above paper

 Dimerizer-Reviews and Reviews of Small Molecule Control of Biologic Processes

Crabtree and Schreiber, TBS 1996 Synthetic ligands for control of biologic processes

Austin DJ, Crabtree GR, Schreiber SL. Proximity versus allostery: the role of regulated protein dimerization in biology.

Klemm, Schreiber and Crabtree Annu Rev Immunol. 1998;16:569-92. Dimerization as a regulatory mechanism in signal transduction.

Specht KM, and Shokat KM. Curr Opin Cell Biol. 2002 Apr;14(2):155-9 The emerging power of chemical genetics

 


Webmaster- Jerry Crabtree Crabtree@stanford.edu Local AttactionsScientific Websites